ENSDARG00000070465


Danio rerio

Features
Gene ID: ENSDARG00000070465
  
Biological name :si:dkey-13n23.3
  
Synonyms : si:dkey-13n23.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 30500968
Gene end: 30504419
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000094223
Ensembl peptide - ENSDARP00000139020
NCBI entrez gene - 100000534     See in Manteia.
swissprot - A5WUN3
swissprot - F1QP08
ZFIN ID - ZDB-GENE-120214-42
Ensembl - ENSDARG00000070465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-5n7.2ENSDARG0000010233924
si:ch211-226f6.1ENSDARG0000009403824
si:dkeyp-106c3.2ENSDARG0000009681624
si:dkey-13n23.3 / si:dkeyp-106c3.2ENSDARG0000009554918
si:dkey-13n23.3ENSDARG0000010271418
CABZ01007829.1ENSDARG0000009876718
si:ch211-282k23.2ENSDARG0000009359114


Protein motifs (from Interpro)
Interpro ID Name
 IPR003656  Zinc finger, BED-type
 IPR012337  Ribonuclease H-like superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr