ENSDARG00000070746


Danio rerio

Features
Gene ID: ENSDARG00000070746
  
Biological name :zgc:110788
  
Synonyms : zgc:110788
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 36839509
Gene end: 36844020
  
Corresponding Affymetrix probe sets: Dr.14518.1.S1_at (Zebrafish Array)   NM_001013288_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094935
Ensembl peptide - ENSDARP00000151906
NCBI entrez gene - 503601     See in Manteia.
RefSeq - NM_001013288
RefSeq Peptide - NP_001013306
swissprot - Q5EAQ9
ZFIN ID - ZDB-GENE-050227-13
Ensembl - ENSDARG00000070746
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:112392ENSDARG0000007115967
sft2d1 / SFT2 domain containing 1 / Q5SSN7* / Q8WV19* / Gm12166* / predicted gene 12166* / Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant 2, mRNA.*ENSDARG0000000736254


Protein motifs (from Interpro)
Interpro ID Name
 IPR007305  Vesicle transport protein, Got1/SFT2-like
 IPR011691  Vesicle transport protein SFT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IBA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr