ENSDARG00000070873


Danio rerio

Features
Gene ID: ENSDARG00000070873
  
Biological name :ccl25b
  
Synonyms : ccl25b / chemokine (C-C motif) ligand 25b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 6259048
Gene end: 6265723
  
Corresponding Affymetrix probe sets: Dr.9122.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095178
Ensembl peptide - ENSDARP00000153984
NCBI entrez gene - 795788     See in Manteia.
RefSeq - NM_001200035
RefSeq Peptide - NP_001186964
swissprot - F1QBE9
ZFIN ID - ZDB-GENE-110222-2
Ensembl - ENSDARG00000070873
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccl25a / chemokine (C-C motif) ligand 25aENSDARG0000011561038


Protein motifs (from Interpro)
Interpro ID Name
 IPR001811  Chemokine interleukin-8-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002548 monocyte chemotaxis IBA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0030593 neutrophil chemotaxis IBA
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0048247 lymphocyte chemotaxis IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IBA
 biological_processGO:0071346 cellular response to interferon-gamma IBA
 biological_processGO:0071347 cellular response to interleukin-1 IBA
 biological_processGO:0071356 cellular response to tumor necrosis factor IBA
 biological_processGO:0097535 lymphoid lineage cell migration into thymus IGI
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0008009 chemokine activity IDA
 molecular_functionGO:0048020 CCR chemokine receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001078 thymus thymus has fewer parts of type lymphocyte , abnormal
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 ZFA:0001094 whole organism whole organism posterior region increased amount , abnormal
whole organism posterior region decreased amount , abnormal
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 ZFA:0005898 caudal hematopoietic tissue caudal hematopoietic tissue hematopoietic stem cell proliferation decreased occurrence , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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