ENSDARG00000070917


Danio rerio

Features
Gene ID: ENSDARG00000070917
  
Biological name :kitlga
  
Synonyms : kitlga / kit ligand a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 18118906
Gene end: 18140537
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101828
Ensembl peptide - ENSDARP00000115847
Ensembl peptide - ENSDARP00000145973
NCBI entrez gene - 553179     See in Manteia.
RefSeq - NM_001018123
RefSeq - XM_005163011
RefSeq Peptide - NP_001018133
swissprot - Q56JH6
swissprot - F1Q6D8
ZFIN ID - ZDB-GENE-070424-1
Ensembl - ENSDARG00000070917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kitlgb / kit ligand bENSDARG0000005804226


Protein motifs (from Interpro)
Interpro ID Name
 IPR003452  Stem cell factor
 IPR009079  Four-helical cytokine-like, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030318 melanocyte differentiation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005173 stem cell factor receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism lacks all parts of type melanocyte , abnormal
Show

 ZFA:0009004 trunk neural crest cell trunk neural crest cell morphology , abnormal
trunk neural crest cell mislocalised , abnormal
trunk neural crest cell elongated , abnormal
Show

 ZFA:0009090 pigment cell pigment cell quality , abnormal
Show

 ZFA:0009091 melanocyte melanocyte irregular spatial pattern , abnormal
melanocyte apoptotic , abnormal
melanocyte decreased amount , abnormal
melanocyte spatial pattern , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr