ENSDARG00000071116


Danio rerio

Features
Gene ID: ENSDARG00000071116
  
Biological name :eepd1
  
Synonyms : eepd1 / endonuclease/exonuclease/phosphatase family domain containing 1
  
Possible biological names infered from orthology : Endonuclease/exonuclease/phosphatase family domain-containing protein 1 / Q3TGW2 / Q7L9B9
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 11270847
Gene end: 11315224
  
Corresponding Affymetrix probe sets: Dr.3074.1.A1_at (Zebrafish Array)   NM_205759_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000095703
NCBI entrez gene - 402965     See in Manteia.
RefSeq - NM_205759
RefSeq Peptide - NP_991322
swissprot - F1Q8T0
ZFIN ID - ZDB-GENE-040426-1831
Ensembl - ENSDARG00000071116
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EEPD1ENSGALG00000039983Gallus gallus
 EEPD1ENSG00000122547Homo sapiens
 Eepd1ENSMUSG00000036611Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003583  Helix-hairpin-helix DNA-binding motif, class 1
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR010994  RuvA domain 2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite nucleus morphology , abnormal
somite nucleus amount , ameliorated
somite morphology , abnormal
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 ZFA:0001058 caudal fin caudal fin morphology , abnormal
Show

 ZFA:0001094 whole organism whole organism morphology , abnormal
whole organism dead , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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