ENSDARG00000071224


Danio rerio

Features
Gene ID: ENSDARG00000071224
  
Biological name :si:ch211-133n4.4
  
Synonyms : si:ch211-133n4.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 3237790
Gene end: 3240605
  
Corresponding Affymetrix probe sets: Dr.24902.1.S1_at (Zebrafish Array)   NM_001077376_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000095939
NCBI entrez gene - 559260     See in Manteia.
RefSeq - NM_001077376
RefSeq Peptide - NP_001070844
swissprot - Q08BC3
ZFIN ID - ZDB-GENE-030131-898
Ensembl - ENSDARG00000071224
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:158445ENSDARG0000007122357
si:ch211-133n4.10ENSDARG0000006361354
si:ch211-133n4.9ENSDARG0000007121644
si:dkey-243k1.3ENSDARG0000010234330
BX664721.2ENSDARG0000006806529
CT573337.2ENSDARG0000011714429
si:dkey-85k7.10ENSDARG0000007384428
si:dkey-85k7.11ENSDARG0000006161127
zgc:172339ENSDARG0000006919027
si:ch211-165i18.2ENSDARG0000007723924
zgc:171534 / ENDOD1* / O94919* / endonuclease domain containing 1*ENSDARG000001052659


Protein motifs (from Interpro)
Interpro ID Name
 IPR001604  DNA/RNA non-specific endonuclease
 IPR020821  Extracellular Endonuclease, subunit A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr