ENSDARG00000071701


Danio rerio

Features
Gene ID: ENSDARG00000071701
  
Biological name :zgc:162941
  
Synonyms : zgc:162941
  
Possible biological names infered from orthology : LYG1 / LYG2 / lysozyme g1 / lysozyme g2 / Lysozyme g-like protein 1 / Lysozyme g-like protein 2 / Q3V1I0 / Q86SG7 / Q8N1E2 / Q9D7Q0
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 20900989
Gene end: 20908036
  
Corresponding Affymetrix probe sets: Dr.3444.1.A1_at (Zebrafish Array)   Dr.3444.2.S1_at (Zebrafish Array)   NM_001082820_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000096987
NCBI entrez gene - 559821     See in Manteia.
RefSeq - NM_001082820
RefSeq Peptide - NP_001076289
swissprot - A3KP47
ZFIN ID - ZDB-GENE-030131-8517
Ensembl - ENSDARG00000071701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYG2ENSGALG00000016761Gallus gallus
 LYG1ENSG00000144214Homo sapiens
 LYG2ENSG00000185674Homo sapiens
 Lyg1ENSMUSG00000026085Mus musculus
 Lyg2ENSMUSG00000061584Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lygl1 / lysozyme g-like 1 / LYG1* / LYG2* / Q9D7Q0* / Q3V1I0* / Q86SG7* / Q8N1E2* / lysozyme g1* / lysozyme g2* / Lysozyme g-like protein 1 * / Lysozyme g-like protein 2 *ENSDARG0000005687483
lygl2 / lysozyme g-like 2 / LYG1* / LYG2* / Q9D7Q0* / Q3V1I0* / Q86SG7* / Q8N1E2* / lysozyme g1* / lysozyme g2* / Lysozyme g-like protein 1 * / Lysozyme g-like protein 2 *ENSDARG0000009956272


Protein motifs (from Interpro)
Interpro ID Name
 IPR002152  Glycoside hydrolase, family 23
 IPR023346  Lysozyme-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009253 peptidoglycan catabolic process IEA
 biological_processGO:0016998 cell wall macromolecule catabolic process IEA
 molecular_functionGO:0003796 lysozyme activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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