ENSDARG00000074289


Danio rerio

Features
Gene ID: ENSDARG00000074289
  
Biological name :tuba4l
  
Synonyms : tuba4l / tubulin, alpha 4 like
  
Possible biological names infered from orthology : Q9JJZ2 / Q9NY65 / TUBA8 / tubulin alpha 8
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 6245219
Gene end: 6252514
  
Corresponding Affymetrix probe sets: Dr.23436.1.S1_at (Zebrafish Array)   NM_199795_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000141066
Ensembl peptide - ENSDARP00000154014
Ensembl peptide - ENSDARP00000098004
NCBI entrez gene - 327377     See in Manteia.
RefSeq - NM_199795
RefSeq Peptide - NP_956089
swissprot - A0A0R4IXS8
swissprot - Q6TGS5
ZFIN ID - ZDB-GENE-030131-5588
Ensembl - ENSDARG00000074289
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUBAL3ENSGALG00000008444Gallus gallus
 TUBA8ENSG00000183785Homo sapiens
 Tuba8ENSMUSG00000030137Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002452  Alpha tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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