ENSDARG00000075045


Danio rerio

Features
Gene ID: ENSDARG00000075045
  
Biological name :cxcl18b
  
Synonyms : chemokine (C-X-C motif) ligand 18b / cxcl18b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49222164
Gene end: 49225890
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102296
NCBI entrez gene - 795785     See in Manteia.
swissprot - A9ZPF8
ZFIN ID - ZDB-GENE-090313-165
Ensembl - ENSDARG00000075045
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001089  CXC chemokine
 IPR001811  Chemokine interleukin-8-like domain
 IPR028469  Interleukin-8


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002690 positive regulation of leukocyte chemotaxis IBA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 biological_processGO:0071621 granulocyte chemotaxis IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0008009 chemokine activity IDA
 molecular_functionGO:0045236 CXCR chemokine receptor binding IBA
 molecular_functionGO:0051916 granulocyte colony-stimulating factor binding IGI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr