ENSDARG00000075129


Danio rerio

Features
Gene ID: ENSDARG00000075129
  
Biological name :mrps11
  
Synonyms : mitochondrial ribosomal protein S11 / mrps11
  
Possible biological names infered from orthology : P82912
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 14512000
Gene end: 14535862
  
Corresponding Affymetrix probe sets: Dr.15752.1.S1_at (Zebrafish Array)   Dr.15752.2.A1_at (Zebrafish Array)   NM_001044797_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000097569
Ensembl peptide - ENSDARP00000120082
NCBI entrez gene - 556272     See in Manteia.
RefSeq - NM_001044797
RefSeq Peptide - NP_001038262
swissprot - F1QDM5
swissprot - Q5VSI2
ZFIN ID - ZDB-GENE-040724-84
Ensembl - ENSDARG00000075129
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRPS11ENSGALG00000006777Gallus gallus
 MRPS11ENSG00000181991Homo sapiens
 Mrps11ENSMUSG00000030611Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001971  Ribosomal protein S11
 IPR018102  Ribosomal S11, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005763 mitochondrial small ribosomal subunit IBA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IBA
 molecular_functionGO:0070181 small ribosomal subunit rRNA binding IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr