ENSDARG00000075163


Danio rerio

Features
Gene ID: ENSDARG00000075163
  
Biological name :cxcl20
  
Synonyms : chemokine (C-X-C motif) ligand 20 / cxcl20
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 42895592
Gene end: 42904329
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102486
NCBI entrez gene - 567537     See in Manteia.
swissprot - A9ZPF6
ZFIN ID - ZDB-GENE-111004-2
Ensembl - ENSDARG00000075163
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001089  CXC chemokine
 IPR001811  Chemokine interleukin-8-like domain
 IPR033899  CXC Chemokine domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002690 positive regulation of leukocyte chemotaxis IBA
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0006952 defense response IEA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0010818 T cell chemotaxis IBA
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0008009 chemokine activity IBA
 molecular_functionGO:0048248 CXCR3 chemokine receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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