ENSDARG00000076238


Danio rerio

Features
Gene ID: ENSDARG00000076238
  
Biological name :gramd1c
  
Synonyms : gramd1c / GRAM domain containing 1c
  
Possible biological names infered from orthology : GRAM domain-containing protein 1C / Q8CI52 / Q8IYS0
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 21131874
Gene end: 21150169
  
Corresponding Affymetrix probe sets: Dr.6268.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129043
Ensembl peptide - ENSDARP00000146528
NCBI entrez gene - 563054     See in Manteia.
RefSeq - XM_005162729
swissprot - E7F236
ZFIN ID - ZDB-GENE-050506-88
Ensembl - ENSDARG00000076238
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GRAMD1CENSGALG00000035629Gallus gallus
 Q8IYS0ENSG00000178075Homo sapiens
 Q8CI52ENSMUSG00000036292Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gramd1bb / GRAM domain containing 1Bb / Q3KR37* / GRAMD1B* / GRAM domain containing 1B*ENSDARG0000007425835
gramd1ba / GRAM domain containing 1Ba / Q3KR37* / Q80TI0* / GRAMD1B* / GRAM domain containing 1B* / Mus musculus GRAM domain containing 1B (Gramd1b), transcript variant 2, mRNA.*ENSDARG0000007538334
gramd1a / GRAM domain containing 1A / Q8VEF1* / Q96CP6* / GRAM domain-containing protein 1A *ENSDARG0000007668933
si:zfos-943e10.1 / Gramd3* / Q96HH9* / GRAMD2B* / GRAM domain containing 2B*ENSDARG000001035229
gramd2aa / GRAM domain containing 2Aa / Q8IUY3* / GRAMD2A* / GRAM domain containing 2A*ENSDARG000001037369


Protein motifs (from Interpro)
Interpro ID Name
 IPR004182  GRAM domain
 IPR031968  VASt domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr