ENSDARG00000076495


Danio rerio

Features
Gene ID: ENSDARG00000076495
  
Biological name :vwc2
  
Synonyms : von Willebrand factor C domain containing 2 / vwc2
  
Possible biological names infered from orthology : Q2TAL6 / Q8C8N3
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 16150654
Gene end: 16191674
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115654
NCBI entrez gene - 798521     See in Manteia.
swissprot - B0I1T8
ZFIN ID - ZDB-GENE-090313-315
Ensembl - ENSDARG00000076495
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VWC2ENSGALG00000013081Gallus gallus
 VWC2ENSG00000188730Homo sapiens
 Vwc2ENSMUSG00000050830Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vwc2l / B0UZC8 / von Willebrand factor C domain containing protein 2-like / B2RUY7* / Q505H4*ENSDARG0000006913435
si:dkey-283b1.7ENSDARG0000005346033
zgc:113531ENSDARG0000003879423


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IMP
 biological_processGO:0030900 forebrain development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain dorsal region increased amount , abnormal
brain BMP signaling pathway increased occurrence , abnormal
brain oligodendrocyte development decreased occurrence , abnormal
brain oligodendrocyte decreased amount , abnormal
brain astrocyte development increased occurrence , abnormal
brain astrocyte increased amount , abnormal
Show

 ZFA:0000059 postoptic commissure postoptic commissure central nervous system projection neuron axonogenesis decreased occurrence , abnormal
Show

 ZFA:0000079 telencephalon telencephalon increased amount , abnormal
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 ZFA:0000101 diencephalon diencephalon decreased amount , abnormal
diencephalon ventral region decreased amount , abnormal
diencephalon neuron differentiation decreased process quality , abnormal
diencephalon GABAergic neuron decreased amount , abnormal
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 ZFA:0000109 forebrain forebrain lacks all parts of type postoptic commissure , abnormal
forebrain lacks all parts of type anterior commissure , abnormal
forebrain lacks all parts of type supraoptic tract , abnormal
forebrain GABAergic neuron differentiation decreased process quality , abnormal
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 ZFA:0000159 tectal ventricle tectal ventricle malformed , abnormal
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 ZFA:0000304 ventral telencephalon ventral telencephalon mislocalised , abnormal
ventral telencephalon decreased amount , abnormal
ventral telencephalon neuron differentiation decreased process quality , abnormal
ventral telencephalon forebrain morphogenesis decreased process quality , abnormal
ventral telencephalon GABAergic neuron decreased amount , abnormal
Show

 ZFA:0000458 ventral thalamus ventral thalamus increased amount , abnormal
ventral thalamus decreased amount , abnormal
ventral thalamus forebrain morphogenesis decreased process quality , abnormal
Show

 ZFA:0000505 dorsal telencephalon dorsal telencephalon forebrain morphogenesis decreased process quality , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased amount , abnormal
whole organism absent , abnormal
Show

 ZFA:0001108 anterior commissure anterior commissure central nervous system projection neuron axonogenesis decreased occurrence , abnormal
Show

 ZFA:0001340 nucleus of the tract of the postoptic commissure nucleus of the tract of the postoptic commissure GABAergic neuron decreased amount , abnormal
Show

 ZFA:0001343 telencephalon diencephalon boundary telencephalon diencephalon boundary malformed , abnormal
Show

 ZFA:0001657 supraoptic tract supraoptic tract central nervous system projection neuron axonogenesis decreased occurrence , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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