ENSDARG00000076533


Danio rerio

Features
Gene ID: ENSDARG00000076533
  
Biological name :nfe2l1b
  
Synonyms : nfe2l1b / nuclear factor, erythroid 2-like 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 28854410
Gene end: 28866095
  
Corresponding Affymetrix probe sets: Dr.12945.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127206
Ensembl peptide - ENSDARP00000127336
Ensembl peptide - ENSDARP00000127352
NCBI entrez gene - 558772     See in Manteia.
RefSeq - XM_005156246
swissprot - U3JAE0
swissprot - U3JAR7
swissprot - U3JAT3
ZFIN ID - ZDB-GENE-120319-2
Ensembl - ENSDARG00000076533
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004826  Basic leucine zipper domain, Maf-type
 IPR004827  Basic-leucine zipper domain
 IPR008917  Transcription factor, Skn-1-like, DNA-binding domain superfamily
 IPR029847  Nuclear factor erythroid 2-related factor 1/NFE2L1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure glutathione decreased amount , abnormal
anatomical structure glutathione disulfide decreased amount , abnormal
anatomical structure decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr