ENSDARG00000077198


Danio rerio

Features
Gene ID: ENSDARG00000077198
  
Biological name :chst12b
  
Synonyms : carbohydrate (chondroitin 4) sulfotransferase 12b / chst12b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 11736420
Gene end: 11737595
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122258
swissprot - E9QHF2
ZFIN ID - ZDB-GENE-090312-144
Ensembl - ENSDARG00000077198
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst12b / si:dkey-26i13.4ENSDARG0000009498166
si:dkey-26i13.7ENSDARG0000009224264
si:dkey-26i13.3ENSDARG0000009548263
si:dkey-26i13.6 / si:dkey-26i13.7ENSDARG0000009220062
si:dkey-26i13.5ENSDARG0000009363661
chst12a / carbohydrate (chondroitin 4) sulfotransferase 12a / CHST12* / Q99LL3* / Q9NRB3* / carbohydrate sulfotransferase 12*ENSDARG0000002878656
chst11 / carbohydrate (chondroitin 4) sulfotransferase 11 / Q9JME2* / Q9NPF2* / carbohydrate sulfotransferase 11*ENSDARG0000003437533
CHST13 / si:ch211-236h17.3 / Q8NET6* / carbohydrate sulfotransferase 13* / carbohydrate (chondroitin 4) sulfotransferase 13*ENSDARG0000000401832
si:ch211-269c21.2 / CHST8* / Q9H2A9* / carbohydrate sulfotransferase 8*ENSDARG0000007456026
chst14 / Q805E5 / carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 / Q80V53* / Q8NCH0* / carbohydrate sulfotransferase 14*ENSDARG0000004301124
chst10 / Q6AXM1 / carbohydrate sulfotransferase 10 / O43529*ENSDARG0000003163223


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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