ENSDARG00000077253


Danio rerio

Features
Gene ID: ENSDARG00000077253
  
Biological name :alkbh6
  
Synonyms : alkbh6 / alkB homolog 6 / Q6IQE9
  
Possible biological names infered from orthology : Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 / Q3KRA9 / Q8K2U2
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 36650064
Gene end: 36654698
  
Corresponding Affymetrix probe sets: Dr.19785.1.A1_at (Zebrafish Array)   NM_001005390_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000098832
NCBI entrez gene - 317736     See in Manteia.
RefSeq - NM_001005390
RefSeq Peptide - NP_001005390
swissprot - Q6IQE9
ZFIN ID - ZDB-GENE-060407-1
Ensembl - ENSDARG00000077253
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALKBH6ENSG00000239382Homo sapiens
 Alkbh6ENSMUSG00000042831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX005407.1 / ALKBH6* / Q3KRA9* / alkB homolog 6*ENSDARG0000011614826


Protein motifs (from Interpro)
Interpro ID Name
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR032862  Alpha-ketoglutarate-dependent dioxygenase alkB homologue 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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