ENSDARG00000077515


Danio rerio

Features
Gene ID: ENSDARG00000077515
  
Biological name :letm2
  
Synonyms : letm2 / leucine zipper-EF-hand containing transmembrane protein 2
  
Possible biological names infered from orthology : LETM1 domain-containing protein LETM2, mitochondrial / leucine zipper and EF-hand containing transmembrane protein 2 / Q2VYF4 / Q7TNU7
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 20589969
Gene end: 20609075
  
Corresponding Affymetrix probe sets: Dr.26418.1.A1_at (Zebrafish Array)   Dr.8718.1.S1_at (Zebrafish Array)   XM_001339351_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000122053
Ensembl peptide - ENSDARP00000149218
NCBI entrez gene - 100006201     See in Manteia.
RefSeq - XM_001339351
swissprot - F1QSQ8
ZFIN ID - ZDB-GENE-090521-4
Ensembl - ENSDARG00000077515
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LETM2ENSGALG00000036049Gallus gallus
 LETM2ENSG00000165046Homo sapiens
 Letm2ENSMUSG00000037363Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
letm1 / Q1LY46 / leucine zipper-EF-hand containing transmembrane protein 1 / Q9Z2I0* / O95202* / Mitochondrial proton/calcium exchanger protein * / leucine zipper and EF-hand containing tra...ENSDARG0000005697846


Protein motifs (from Interpro)
Interpro ID Name
 IPR003034  SAP domain
 IPR011685  LETM1-like
 IPR033122  Letm1 ribosome-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006875 cellular metal ion homeostasis IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr