ENSDARG00000077830


Danio rerio

Features
Gene ID: ENSDARG00000077830
  
Biological name :borcs5
  
Synonyms : BLOC-1 related complex subunit 5 / borcs5 / Q5XIX8
  
Possible biological names infered from orthology : Q969J3 / Q9D920
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 17920361
Gene end: 17925146
  
Corresponding Affymetrix probe sets: Dr.18715.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000087790
Ensembl peptide - ENSDARP00000144792
NCBI entrez gene - 449650     See in Manteia.
swissprot - A0A0M3HEL1
swissprot - Q5XIX8
ZFIN ID - ZDB-GENE-041010-83
Ensembl - ENSDARG00000077830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BORCS5ENSGALG00000040393Gallus gallus
 BORCS5ENSG00000165714Homo sapiens
 Borcs5ENSMUSG00000042992Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018780  BLOC-1-related complex subunit 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032418 lysosome localization IEA
 biological_processGO:0072384 organelle transport along microtubule ISS
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005873 plus-end kinesin complex ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031224 intrinsic component of membrane ISS
 cellular_componentGO:0098574 cytoplasmic side of lysosomal membrane ISS
 cellular_componentGO:0099078 BORC complex ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr