ENSDARG00000077943


Danio rerio

Features
Gene ID: ENSDARG00000077943
  
Biological name :ints5
  
Synonyms : integrator complex subunit 5 / ints5
  
Possible biological names infered from orthology : Q6P9B9 / Q8CHT3
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 45551993
Gene end: 45558490
  
Corresponding Affymetrix probe sets: Dr.17427.1.A1_at (Zebrafish Array)   XM_687970_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000141758
NCBI entrez gene - 564642     See in Manteia.
RefSeq - XM_687970
swissprot - A0A0R4IY96
ZFIN ID - ZDB-GENE-090908-2
Ensembl - ENSDARG00000077943
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 INTS5ENSG00000185085Homo sapiens
 Ints5ENSMUSG00000071652Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR029444  Integrator complex subunit 5, C-terminal
 IPR029445  Integrator complex subunit 5, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043484 regulation of RNA splicing IMP


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000007 blood blood lacks parts or has fewer parts of type nucleate erythrocyte , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr