ENSDARG00000078600


Danio rerio

Features
Gene ID: ENSDARG00000078600
  
Biological name :ldlrad3
  
Synonyms : ldlrad3 / low density lipoprotein receptor class A domain containing 3
  
Possible biological names infered from orthology : A2AR95 / Q86YD5
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 37325054
Gene end: 37331513
  
Corresponding Affymetrix probe sets: Dr.3011.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000097850
NCBI entrez gene - 570705     See in Manteia.
RefSeq - NM_001130607
RefSeq Peptide - NP_001124079
swissprot - B3DJ30
ZFIN ID - ZDB-GENE-030131-1533
Ensembl - ENSDARG00000078600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LDLRAD3ENSGALG00000038913Gallus gallus
 Q86YD5ENSG00000179241Homo sapiens
 A2AR95ENSMUSG00000048058Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lrp12 / low density lipoprotein receptor-related protein 12 / Q8BUJ9* / Q9Y561* / LDL receptor related protein 12* / Mus musculus low density lipoprotein-related protein 12 (Lrp12), transcr...ENSDARG0000009884527
lrp3 / low density lipoprotein receptor-related protein 3 / O75074* / LDL receptor related protein 3*ENSDARG0000000848525
lrp10 / low density lipoprotein receptor-related protein 10 / Q7TQH7* / Q7Z4F1* / LDL receptor related protein 10*ENSDARG0000005453925


Protein motifs (from Interpro)
Interpro ID Name
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr