ENSDARG00000078822


Danio rerio

Features
Gene ID: ENSDARG00000078822
  
Biological name :ccdc18
  
Synonyms : ccdc18 / coiled-coil domain containing 18
  
Possible biological names infered from orthology : Coiled-coil domain-containing protein 18 / Q5T9S5 / Q640L5
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 10467799
Gene end: 10564019
  
Corresponding Affymetrix probe sets: Dr.4413.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000148216
Ensembl peptide - ENSDARP00000118802
Ensembl peptide - ENSDARP00000156978
NCBI entrez gene - 564276     See in Manteia.
RefSeq - XM_687620
swissprot - A8E7I8
ZFIN ID - ZDB-GENE-030131-5414
Ensembl - ENSDARG00000078822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCDC18ENSGALG00000005889Gallus gallus
 CCDC18ENSG00000122483Homo sapiens
 Ccdc18ENSMUSG00000056531Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-389b16.1 / CCDC18* / Q5T9S5* / Q640L5* / coiled-coil domain containing 18* / Coiled-coil domain-containing protein 18 *ENSDARG000001015865


Protein motifs (from Interpro)
Interpro ID Name
 IPR029613  Coiled-coil domain-containing protein 18/Cytoskeletal protein Sojo


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr