ENSDARG00000079217


Danio rerio

Features
Gene ID: ENSDARG00000079217
  
Biological name :bbs9
  
Synonyms : Bardet-Biedl syndrome 9 / bbs9
  
Possible biological names infered from orthology : Protein PTHB1 / Q3SYG4 / Q811G0
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 6957582
Gene end: 7062949
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097615
Ensembl peptide - ENSDARP00000125031
Ensembl peptide - ENSDARP00000151223
swissprot - E7F6E0
swissprot - F8W5N6
ZFIN ID - ZDB-GENE-081027-4
Ensembl - ENSDARG00000079217
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031650Gallus gallus
 BBS9ENSG00000122507Homo sapiens
 Bbs9ENSMUSG00000035919Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR026511  Parathyroid hormone-responsive B1
 IPR028073  PTHB1, N-terminal domain
 IPR028074  PTHB1, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0001843 neural tube closure IMP
 biological_processGO:0007369 gastrulation IMP
 biological_processGO:0010842 retina layer formation IMP
 biological_processGO:0048793 pronephros development IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0097205 renal filtration IMP
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0034464 BBSome IBA


Pathways (from Reactome)
Pathway description
BBSome-mediated cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
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 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000135 notochord notochord kinked , abnormal
notochord increased width , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0000155 somite somite shape , abnormal
somite increased width , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001135 neural tube neural tube closure incomplete , abnormal
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 ZFA:0001466 photoreceptor outer segment layer photoreceptor outer segment layer absent , abnormal
Show

 ZFA:0001620 pronephric proximal convoluted tubule pronephric proximal convoluted tubule morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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