ENSDARG00000079484


Danio rerio

Features
Gene ID: ENSDARG00000079484
  
Biological name :kcnt1
  
Synonyms : kcnt1 / potassium channel, subfamily T, member 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 4875473
Gene end: 4923427
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000157089
Ensembl peptide - ENSDARP00000101809
Ensembl peptide - ENSDARP00000126197
Ensembl peptide - ENSDARP00000150285
Ensembl peptide - ENSDARP00000151502
Ensembl peptide - ENSDARP00000153979
swissprot - E7FA05
swissprot - I3ITD4
ZFIN ID - ZDB-GENE-091231-1
Ensembl - ENSDARG00000079484
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-21e5.1ENSDARG0000010486878
CR392045.1ENSDARG0000011306466
kcnt2 / potassium channel, subfamily T, member 2 / Q6UVM3* / potassium sodium-activated channel subfamily T member 2*ENSDARG0000007581256
kcnma1a / potassium large conductance calcium-activated channel, subfamily M, alpha member 1a / KCNMA1* / Q12791* / potassium calcium-activated channel subfamily M alpha 1* / potassium larg...ENSDARG0000007984019
CABZ01092907.1 / KCNMA1* / Q12791* / potassium calcium-activated channel subfamily M alpha 1* / potassium large conductance calcium-activated channel, subfamily M, alpha member 1*ENSDARG0000011072711


Protein motifs (from Interpro)
Interpro ID Name
 IPR003929  Potassium channel, BK, alpha subunit
 IPR013099  Potassium channel domain
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IBA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr