ENSDARG00000079957


Danio rerio

Features
Gene ID: ENSDARG00000079957
  
Biological name :tceb3l
  
Synonyms : tceb3l / transcription elongation factor B (SIII), polypeptide 3, like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 2315110
Gene end: 2336584
  
Corresponding Affymetrix probe sets: Dr.2649.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103646
NCBI entrez gene - 768168     See in Manteia.
RefSeq - NM_001288658
RefSeq Peptide - NP_001275587
swissprot - E7F7H1
ZFIN ID - ZDB-GENE-131029-2
Ensembl - ENSDARG00000079957
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046637Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eloa / elongin A / ELOA2* / ELOA3* / A6NLF2* / ELOA3B* / ELOA3C* / ELOA3D* / Q14241* / Q3SY89* / Q8CB77* / Q8IYF1* / Q8NG57* / elongin A3* / elongin A2* / elongin A3 family member B* / elon...ENSDARG0000010236518


Protein motifs (from Interpro)
Interpro ID Name
 IPR003617  Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
 IPR010684  RNA polymerase II transcription factor SIII, subunit A
 IPR017923  Transcription factor IIS, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0070449 elongin complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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