ENSDARG00000080006


Danio rerio

Features
Gene ID: ENSDARG00000080006
  
Biological name :tmem41b
  
Synonyms : A1A5V7 / tmem41b / transmembrane protein 41B
  
Possible biological names infered from orthology : Q5BJD5 / Q8K1A5
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 65103874
Gene end: 65120746
  
Corresponding Affymetrix probe sets: Dr.23209.1.A1_at (Zebrafish Array)   NM_001079987_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000102085
Ensembl peptide - ENSDARP00000134440
Ensembl peptide - ENSDARP00000089049
NCBI entrez gene - 561208     See in Manteia.
RefSeq - NM_001079987
RefSeq Peptide - NP_001073456
swissprot - A1A5V7
ZFIN ID - ZDB-GENE-061215-138
Ensembl - ENSDARG00000080006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZIL6ENSGALG00000005815Gallus gallus
 Q5BJD5ENSG00000166471Homo sapiens
 Q8K1A5ENSMUSG00000047554Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NV38 / tmem41ab / transmembrane protein 41ab / Q9D8U2* / Q96HV5* / TMEM41A* / transmembrane protein 41A*ENSDARG0000002677126
Q502G2 / tmem41aa / transmembrane protein 41aa / Q9D8U2* / Q96HV5* / TMEM41A* / transmembrane protein 41A*ENSDARG0000007002826


Protein motifs (from Interpro)
Interpro ID Name
 IPR032816  SNARE associated Golgi protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008045 motor neuron axon guidance IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009052 motor neuron motor neuron axon mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr