Manteia

ENSDARG00000085409

Danio rerio

Features

Gene ID:	ENSDARG00000085409

Biological name :	RF00001

Synonyms :	RF00001

Possible biological names infered from orthology :	n-R5s185 / nuclear encoded rRNA 5S 185

Species:	Danio rerio

Chr. number:	2
Strand:	-1
Band:
Gene start:	40595375
Gene end:	40595494

Corresponding Affymetrix probe sets:

Cross references:	Ensembl - ENSDARG00000085409

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
n-R5s185	ENSMUSG00000065887	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000114441	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000114391	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000114042	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000114969	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000116657	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000113974	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000112634	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000111835	83
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000082746	78
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000080370	78
RF00001	ENSDARG00000099863	77
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000085364	73
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000113753	73
RF00001 / RNA5SP492* / RNA, 5S ribosomal pseudogene 492*	ENSDARG00000080449	73
RF00001 / RNA5SP401* / RNA, 5S ribosomal pseudogene 401*	ENSDARG00000113052	73
RF00001 / RNA5SP492* / RNA, 5S ribosomal pseudogene 492*	ENSDARG00000106869	70
RF00001 / RNA5SP286* / RNA, 5S ribosomal pseudogene 286*	ENSDARG00000080918	69
RF00001	ENSDARG00000101311	66
RF00001	ENSDARG00000107680	65
RF00001	ENSDARG00000101620	65

Protein motifs (from Interpro)

Interpro ID

Name

No match

Gene Ontology (GO)

Type

GO ID

Term

Ev.Code

No match

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr