ENSDARG00000086104


Danio rerio

Features
Gene ID: ENSDARG00000086104
  
Biological name :slco5a1b
  
Synonyms : slco5a1a / slco5a1b / solute carrier organic anion transporter family member 5A1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42382472
Gene end: 42415902
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109447
Ensembl peptide - ENSDARP00000104619
Ensembl peptide - ENSDARP00000121977
Ensembl peptide - ENSDARP00000116625
NCBI entrez gene - 101883455     See in Manteia.
NCBI entrez gene - 570033     See in Manteia.
RefSeq - NM_001353347
RefSeq - NM_001353348
RefSeq Peptide - NP_001340276
RefSeq Peptide - NP_001340277
swissprot - E9QB47
swissprot - E9QB40
swissprot - E7EYQ1
swissprot - F1R5Q0
ZFIN ID - ZDB-GENE-070912-587
ZFIN ID - ZDB-GENE-090316-1
Ensembl - ENSDARG00000086104
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain
 IPR029403  RESP18 domain
 IPR033522  Receptor-type tyrosine-protein phosphatase-like N/N2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr