ENSDARG00000087251


Danio rerio

Features
Gene ID: ENSDARG00000087251
  
Biological name :si:ch73-50f9.4
  
Synonyms : si:ch73-50f9.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 50289039
Gene end: 50311009
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127767
Ensembl peptide - ENSDARP00000106753
NCBI entrez gene - 799740     See in Manteia.
RefSeq - XM_017351875
swissprot - X1WC24
swissprot - E7F9E3
ZFIN ID - ZDB-GENE-131122-9
Ensembl - ENSDARG00000087251
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-76m11.8 / si:dkey-238o14.1ENSDARG0000010434180
si:dkey-27n6.1 / si:ch211-196h24.1ENSDARG0000009938179
si:dkey-4j21.2 / si:dkey-261o4.6ENSDARG0000009887979
si:ch211-246b8.1ENSDARG0000009943279
si:dkey-28i19.3ENSDARG0000009817779
si:ch211-39d8.1 / si:ch211-223g7.6 / si:dkeyp-120g4.1ENSDARG0000010194879
si:ch211-215p11.3ENSDARG0000010145079
si:rp71-7l19.2 / si:dkeyp-51g9.4ENSDARG0000010263879
si:dkey-211i20.2ENSDARG0000010300379
si:dkey-8o9.2 / si:dkey-190j3.6 / si:dkey-84h14.2 / si:ch211-207e19.2ENSDARG0000009861079
si:ch211-39d8.1 / si:ch211-232d10.1ENSDARG0000010416679
si:dkey-84h14.1ENSDARG0000008729379
si:dkey-165o8.1ENSDARG0000009836979
si:dkey-151g22.1ENSDARG0000009845279
si:ch211-223g7.2 / si:ch211-133h13.1 / si:ch211-227e10.6ENSDARG0000010326579
zgc:174180ENSDARG0000010138978
si:dkey-178j11.5ENSDARG0000009811578
si:dkey-29p23.1ENSDARG0000011389678
si:dkey-16p6.4ENSDARG0000006816178
si:dkey-240n22.3ENSDARG0000009501378


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr