ENSDARG00000087518


Danio rerio

Features
Gene ID: ENSDARG00000087518
  
Biological name :si:dkey-261p22.1
  
Synonyms : si:dkey-261p22.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 43730606
Gene end: 43863102
  
Corresponding Affymetrix probe sets: Dr.16197.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000146678
Ensembl peptide - ENSDARP00000092736
Ensembl peptide - ENSDARP00000115543
Ensembl peptide - ENSDARP00000152436
swissprot - F1Q912
swissprot - E9QIY5
ZFIN ID - ZDB-GENE-081103-60
Ensembl - ENSDARG00000087518
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-191a16.5ENSDARG0000009654532
si:ch211-191a16.2ENSDARG0000009566532


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr