ENSDARG00000087782


Danio rerio

Features
Gene ID: ENSDARG00000087782
  
Biological name :rnf152
  
Synonyms : ring finger protein 152 / rnf152
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF152 / Q8BG47 / Q8N8N0
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 27867830
Gene end: 27871054
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106876
swissprot - F1Q9Q8
ZFIN ID - ZDB-GENE-050327-84
Ensembl - ENSDARG00000087782
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E1C2W7ENSGALG00000028822Gallus gallus
 Q8N8N0ENSG00000176641Homo sapiens
 Q8BG47ENSMUSG00000047496Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR033609  E3 ubiquitin-protein ligase RNF152


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0010508 positive regulation of autophagy IEA
 biological_processGO:1904262 negative regulation of TORC1 signaling IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
E3 ubiquitin ligases ubiquitinate target proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain decreased amount , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary decreased amount , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
eye decreased diameter , abnormal
eye decreased amount , abnormal
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 ZFA:0000109 forebrain forebrain decreased amount , abnormal
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 ZFA:0000128 midbrain midbrain decreased amount , abnormal
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 ZFA:0001064 rhombomere rhombomere decreased size , abnormal
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 ZFA:0001135 neural tube neural tube decreased width , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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