ENSDARG00000088029


Danio rerio

Features
Gene ID: ENSDARG00000088029
  
Biological name :si:ch73-125k17.2
  
Synonyms : si:ch73-125k17.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 33171765
Gene end: 33176689
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064152
Ensembl peptide - ENSDARP00000125743
NCBI entrez gene - 793310     See in Manteia.
swissprot - F1RA84
swissprot - I3IS76
ZFIN ID - ZDB-GENE-120215-164
Ensembl - ENSDARG00000088029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
olfcs2 / olfactory receptor C family, s2ENSDARG0000010045146
v2rc1 / vomeronasal 2 receptor, c1ENSDARG0000009473545
si:ch211-229c8.4ENSDARG0000005615444
v2rx3 / vomeronasal 2 receptor, x3ENSDARG0000006187344
v2rc2 / vomeronasal 2 receptor, c2ENSDARG0000005595243


Protein motifs (from Interpro)
Interpro ID Name
 IPR000337  GPCR, family 3
 IPR001828  Receptor, ligand binding region
 IPR004073  GPCR, family 3, vomeronasal receptor, type 2
 IPR011500  GPCR, family 3, nine cysteines domain
 IPR017978  GPCR family 3, C-terminal
 IPR017979  GPCR, family 3, conserved site
 IPR028082  Periplasmic binding protein-like I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr