ENSDARG00000089009


Danio rerio

Features
Gene ID: ENSDARG00000089009
  
Biological name :frmpd1b
  
Synonyms : FERM and PDZ domain containing 1b / frmpd1b
  
Possible biological names infered from orthology : A2AKB4 / FERM and PDZ domain containing 1 / FERM and PDZ domain-containing protein 1 / FRMPD1 / Q5SYB0
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4191136
Gene end: 4273396
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105629
NCBI entrez gene - 101882587     See in Manteia.
swissprot - E7FEY8
ZFIN ID - ZDB-GENE-140328-1
Ensembl - ENSDARG00000089009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FRMPD1ENSGALG00000023036Gallus gallus
 FRMPD1ENSG00000070601Homo sapiens
 A2AKB4ENSMUSG00000035615Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
frmpd3 / FERM and PDZ domain containing 3 / Q5JV73*ENSDARG0000007486518
tlr7 / toll-like receptor 7 / FRMPD4* / Q14CM0* / FERM and PDZ domain containing 4*ENSDARG0000007568516
frmpd1a / FERM and PDZ domain containing 1a / A2AKB4* / FRMPD1* / Q5SYB0* / FERM and PDZ domain containing 1* / FERM and PDZ domain-containing protein 1 *ENSDARG0000007907412


Protein motifs (from Interpro)
Interpro ID Name
 IPR000299  FERM domain
 IPR001478  PDZ domain
 IPR011993  PH-like domain superfamily
 IPR014352  FERM/acyl-CoA-binding protein superfamily
 IPR019748  FERM central domain
 IPR019749  Band 4.1 domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005856 cytoskeleton IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr