ENSDARG00000089836


Danio rerio

Features
Gene ID: ENSDARG00000089836
  
Biological name :si:dkey-17e16.10
  
Synonyms : si:dkey-17e16.10
  
Possible biological names infered from orthology : 28S ribosomal protein S12, mitochondrial / mitochondrial ribosomal protein S12 / MRPS12 / O15235 / O35680
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 25561284
Gene end: 25565428
  
Corresponding Affymetrix probe sets: Dr.18218.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116443
Ensembl peptide - ENSDARP00000152506
NCBI entrez gene - 793878     See in Manteia.
RefSeq - XM_009295434
swissprot - E7F8G8
ZFIN ID - ZDB-GENE-091204-48
Ensembl - ENSDARG00000089836
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRPS12ENSGALG00000038667Gallus gallus
 MRPS12ENSG00000128626Homo sapiens
 Mrps12ENSMUSG00000045948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005679  Ribosomal protein S12, bacterial-type
 IPR006032  Ribosomal protein S12/S23
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005761 mitochondrial ribosome IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr