ENSDARG00000089869


Danio rerio

Features
Gene ID: ENSDARG00000089869
  
Biological name :zgc:172218
  
Synonyms : si:ch211-226h8.8 / zgc:172218
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 25236657
Gene end: 25237839
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000030257
Ensembl peptide - ENSDARP00000121868
NCBI entrez gene - 793798     See in Manteia.
RefSeq - NM_001110119
RefSeq Peptide - NP_001103589
swissprot - A8WG67
swissprot - A3KQV5
ZFIN ID - ZDB-GENE-050208-695
ZFIN ID - ZDB-GENE-080219-50
Ensembl - ENSDARG00000089869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-226h8.8ENSDARG0000009419999
si:ch211-226h8.4 / si:ch211-226h8.11ENSDARG0000009324999
si:ch211-226h8.14ENSDARG0000008871383
si:ch211-154a22.8ENSDARG0000008758379
BX950205.1ENSDARG0000008640879
si:ch211-226h8.4ENSDARG0000008622177
si:ch211-12h2.8ENSDARG0000008892363
zgc:171781ENSDARG0000008624762
si:ch211-12h2.6ENSDARG0000009384157
si:ch211-226h8.6ENSDARG0000007709755
si:ch211-12h2.6 / si:dkey-240e12.6ENSDARG0000011013753
si:dkeyp-98a7.4 / si:dkeyp-98a7.9ENSDARG0000008758449
si:dkeyp-98a7.8ENSDARG0000009467449
si:dkeyp-98a7.3ENSDARG0000009092949
si:dkeyp-98a7.7ENSDARG0000008889549
si:dkeyp-98a7.4 / si:dkeyp-98a7.5 / si:ch211-250e5.9ENSDARG0000008952549
si:dkeyp-98a7.3ENSDARG0000010722648
si:dkeyp-98a7.3ENSDARG0000009609747
si:dkey-179j5.5ENSDARG0000007453838
AL929192.1ENSDARG0000010668432


Protein motifs (from Interpro)
Interpro ID Name
 IPR000922  D-galactoside/L-rhamnose binding SUEL lectin domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr