ENSDARG00000090971


Danio rerio

Features
Gene ID: ENSDARG00000090971
  
Biological name :cc2d2a
  
Synonyms : cc2d2a / coiled-coil and C2 domain containing 2A
  
Possible biological names infered from orthology : Coiled-coil and C2 domain-containing protein 2A / Q8CFW7 / Q9P2K1
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 2191773
Gene end: 2260732
  
Corresponding Affymetrix probe sets: Dr.5080.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000107405
Ensembl peptide - ENSDARP00000150494
swissprot - E7F3T4
ZFIN ID - ZDB-GENE-030131-2291
Ensembl - ENSDARG00000090971
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CC2D2AENSGALG00000014514Gallus gallus
 CC2D2AENSG00000048342Homo sapiens
 Cc2d2aENSMUSG00000039765Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR028928  CC2D2A, N-terminal, C2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035845 photoreceptor cell outer segment organization IMP
 cellular_componentGO:0032391 photoreceptor connecting cilium IDA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000150 pronephric duct pronephric duct cystic , abnormal
pronephric duct dilated , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0000152 retina retina has fewer parts of type eye photoreceptor cell , abnormal
Show

 ZFA:0001094 whole organism whole organism curvature , abnormal
whole organism lethal (sensu genetics) , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curvature , abnormal
Show

 ZFA:0001557 pronephric glomerulus pronephric glomerulus dilated , abnormal
Show

 ZFA:0009154 eye photoreceptor cell eye photoreceptor cell axoneme decreased length , abnormal
eye photoreceptor cell photoreceptor outer segment decreased length , abnormal
eye photoreceptor cell photoreceptor outer segment disorganized , abnormal
eye photoreceptor cell cytoplasmic vesicle mislocalised , abnormal
eye photoreceptor cell photoreceptor outer segment membrane disorganized , abnormal
Show

 ZFA:0009262 retinal cone cell retinal cone cell photoreceptor outer segment decreased length , abnormal
retinal cone cell photoreceptor outer segment malformed , abnormal
Show

 ZFA:0009275 retinal rod cell retinal rod cell photoreceptor outer segment decreased length , abnormal
retinal rod cell photoreceptor outer segment malformed , abnormal
Show

 ZFA:0009367 neuromast hair cell neuromast hair cell decreased amount , abnormal
neuromast hair cell decreased amount , ameliorated
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr