ENSDARG00000091198


Danio rerio

Features
Gene ID: ENSDARG00000091198
  
Biological name :urm1
  
Synonyms : ubiquitin related modifier 1 / urm1
  
Possible biological names infered from orthology : Q9BTM9 / Q9D2P4
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 10313024
Gene end: 10326025
  
Corresponding Affymetrix probe sets: Dr.9887.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000108653
Ensembl peptide - ENSDARP00000120675
NCBI entrez gene - 558120     See in Manteia.
RefSeq - XM_021479180
RefSeq - NM_001328092
RefSeq Peptide - NP_001315021
swissprot - F2Z4T6
swissprot - E7F6T4
ZFIN ID - ZDB-GENE-091204-300
Ensembl - ENSDARG00000091198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 URM1ENSGALG00000004971Gallus gallus
 URM1ENSG00000167118Homo sapiens
 Urm1ENSMUSG00000069020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012675  Beta-grasp domain superfamily
 IPR015221  Ubiquitin-related modifier 1
 IPR016155  Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032447 protein urmylation IEA
 biological_processGO:0034227 tRNA thio-modification IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr