ENSDARG00000091293


Danio rerio

Features
Gene ID: ENSDARG00000091293
  
Biological name :dmxl2
  
Synonyms : dmxl2 / Dmx-like 2
  
Possible biological names infered from orthology : DmX-like protein 2 / Q8BPN8 / Q8TDJ6
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 39669255
Gene end: 39787040
  
Corresponding Affymetrix probe sets: Dr.12467.1.A1_at (Zebrafish Array)   Dr.5878.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124048
Ensembl peptide - ENSDARP00000124137
Ensembl peptide - ENSDARP00000142022
NCBI entrez gene - 378958     See in Manteia.
RefSeq - NM_001302235
RefSeq Peptide - NP_001289164
swissprot - F8W3S6
swissprot - A0A0R4IWM7
swissprot - F8W4U2
ZFIN ID - ZDB-GENE-031007-6
Ensembl - ENSDARG00000091293
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMXL2ENSGALG00000039924Gallus gallus
 DMXL2ENSG00000104093Homo sapiens
 Dmxl2ENSMUSG00000041268Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR022033  RAVE complex protein Rav1 C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IMP
 biological_processGO:0007035 vacuolar acidification IBA
 biological_processGO:0030100 regulation of endocytosis IMP
 biological_processGO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IBA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IMP
 biological_processGO:1901546 regulation of synaptic vesicle lumen acidification IMP
 cellular_componentGO:0043291 RAVE complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
post-vent region kinked , abnormal
post-vent region curved , abnormal
Show

 ZFA:0005245 xanthoblast xanthoblast neural crest cell aggregated , abnormal
Show

 ZFA:0009091 melanocyte melanocyte decreased amount , abnormal
Show

 ZFA:0009165 neural crest cell neural crest cell mislocalised , abnormal
Show

 ZFA:0009249 melanoblast melanoblast neural crest cell aggregated , abnormal
Show

 ZFA:0009367 neuromast hair cell neuromast hair cell vacuolar proton-transporting V-type ATPase, V1 domain mislocalised , abnormal
neuromast hair cell synaptic vesicle lumen decreased acidity , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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