ENSDARG00000092155


Danio rerio

Features
Gene ID: ENSDARG00000092155
  
Biological name :apoc2
  
Synonyms : apoc2 / apolipoprotein C-II
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 23984179
Gene end: 23994642
  
Corresponding Affymetrix probe sets: Dr.24953.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144139
Ensembl peptide - ENSDARP00000112765
NCBI entrez gene - 568972     See in Manteia.
RefSeq - NM_001326448
RefSeq Peptide - NP_001313377
swissprot - E9QEQ1
ZFIN ID - ZDB-GENE-030131-2168
Ensembl - ENSDARG00000092155
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008019  Apolipoprotein C-II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0042159 lipoprotein catabolic process IMP
 biological_processGO:0043085 positive regulation of catalytic activity IEA
 cellular_componentGO:0042627 chylomicron IEA
 molecular_functionGO:0008047 enzyme activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000006 ball ball increased diameter , abnormal
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 ZFA:0000037 anatomical structure anatomical structure cholesterol increased amount , abnormal
anatomical structure triglyceride increased amount , abnormal
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 ZFA:0000084 yolk yolk increased size , abnormal
Show

 ZFA:0000106 extension extension decreased length , abnormal
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 ZFA:0000123 liver liver decreased amount , abnormal
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 ZFA:0000140 pancreas pancreas morphology , abnormal
pancreas growth growth quality of occurrent , abnormal
pancreas growth increased process quality , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism decreased amount , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel angiogenesis delayed , abnormal
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 ZFA:0005024 trunk vasculature trunk vasculature lipid increased amount , abnormal
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 ZFA:0005035 subintestinal vein subintestinal vein angiogenesis delayed , abnormal
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 ZFA:0005654 blood plasma blood plasma high-density lipoprotein decreased amount , abnormal
blood plasma low-density lipoprotein increased amount , abnormal
blood plasma very-low-density lipoprotein increased amount , abnormal
blood plasma triglyceride increased amount , abnormal
blood plasma cholesterol amount , ameliorated
blood plasma cholesterol increased amount , abnormal
blood plasma cholesteryl ester increased amount , abnormal
blood plasma triglyceride amount , ameliorated
Show

 ZFA:0009141 macrophage macrophage lipid increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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