ENSDARG00000092170


Danio rerio

Features
Gene ID: ENSDARG00000092170
  
Biological name :apoc1
  
Synonyms : apoc1 / apolipoprotein C-I
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 23972126
Gene end: 23973721
  
Corresponding Affymetrix probe sets: Dr.5674.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118222
Ensembl peptide - ENSDARP00000121190
NCBI entrez gene - 570638     See in Manteia.
RefSeq - NM_001291886
RefSeq - NM_001291887
RefSeq Peptide - NP_001278815
RefSeq Peptide - NP_001278816
swissprot - E9QDI1
swissprot - E9QFX0
ZFIN ID - ZDB-GENE-030131-1074
Ensembl - ENSDARG00000092170
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006781  Apolipoprotein C-I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042074 cell migration involved in gastrulation IMP
 biological_processGO:0042157 lipoprotein metabolic process IEA
 cellular_componentGO:0005576 extracellular region IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000086 EVL EVL epiboly temporally extended , abnormal
Show

 ZFA:0000088 YSL YSL epiboly temporally extended , abnormal
Show

 ZFA:0000711 DEL DEL epiboly arrested , abnormal
DEL epiboly temporally extended , abnormal
Show

 ZFA:0001094 whole organism whole organism malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr