ENSDARG00000092609


Danio rerio

Features
Gene ID: ENSDARG00000092609
  
Biological name :aup1
  
Synonyms : ancient ubiquitous protein 1 / aup1 / Q6PBN5
  
Possible biological names infered from orthology : ancient ubiquitous protein 1 isoform 2 / AUP1, lipid droplet regulating VLDL assembly factor / Q9Y679
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 5835134
Gene end: 5860184
  
Corresponding Affymetrix probe sets: Dr.2621.1.A1_at (Zebrafish Array)   NM_199690_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000054866
Ensembl peptide - ENSDARP00000124945
NCBI entrez gene - 324654     See in Manteia.
RefSeq - NM_199690
RefSeq - XM_005173083
RefSeq Peptide - NP_955984
swissprot - Q6PBN5
swissprot - F8W5X2
ZFIN ID - ZDB-GENE-030131-3375
Ensembl - ENSDARG00000092609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AUP1ENSG00000115307Homo sapiens
 Aup1ENSMUSG00000068328Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003892  Ubiquitin system component Cue


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IBA
 biological_processGO:0050790 regulation of catalytic activity IEA
 cellular_componentGO:0000839 Hrd1p ubiquitin ligase ERAD-L complex IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0043130 ubiquitin binding IBA
 molecular_functionGO:0097027 ubiquitin-protein transferase activator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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