ENSDARG00000092872


Danio rerio

Features
Gene ID: ENSDARG00000092872
  
Biological name :upk3b
  
Synonyms : upk3b / uroplakin 3b
  
Possible biological names infered from orthology : AC093668.1 / AC093668.2 / AC105052.1 / B0FP48 / E5RIL1 / Q9BT76 / Upk3bl / UPK3BL1 / UPK3BL2 / uroplakin 3B-like / uroplakin 3B like 1 / uroplakin 3B like 2
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 59252701
Gene end: 59264707
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113175
NCBI entrez gene - 798916     See in Manteia.
RefSeq - NM_001100063
RefSeq Peptide - NP_001093533
swissprot - A2CE76
ZFIN ID - ZDB-GENE-060526-348
Ensembl - ENSDARG00000092872
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046288Gallus gallus
 AC093668.1ENSG00000270249Homo sapiens
 AC093668.2ENSG00000272949Homo sapiens
 AC105052.1ENSG00000205236Homo sapiens
 B0FP48ENSG00000267368Homo sapiens
 E5RIL1ENSG00000284981Homo sapiens
 UPK3BENSG00000243566Homo sapiens
 Upk3bENSMUSG00000042985Mus musculus
 Upk3blENSMUSG00000006143Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024825  Uroplakin-3a
 IPR024831  Uroplakin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0072046 establishment of planar polarity involved in nephron morphogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye morphology , abnormal
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 ZFA:0000150 pronephric duct pronephric duct cilium kinked , abnormal
pronephric duct cilium shortened , abnormal
pronephric duct epithelial cell lacks parts or has fewer parts of type epithelial cell microvillus, abnormal
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 ZFA:0001058 caudal fin caudal fin curvature , abnormal
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 ZFA:0001114 head head morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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