ENSDARG00000093272


Danio rerio

Features
Gene ID: ENSDARG00000093272
  
Biological name :igic1s1
  
Synonyms : igic1s1 / immunoglobulin light iota constant 1, s1 / zgc:153659
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 38194136
Gene end: 38197040
  
Corresponding Affymetrix probe sets: DrAffx.1.69.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120591
Ensembl peptide - ENSDARP00000096416
NCBI entrez gene - 100149821     See in Manteia.
RefSeq - XM_017353889
swissprot - M9MMB7
swissprot - F1QAA3
ZFIN ID - ZDB-GENE-051013-12
ZFIN ID - ZDB-GENE-060825-311
Ensembl - ENSDARG00000093272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
igl3v5 / immunoglobulin light 3 variable 5ENSDARG0000007998798
zgc:153659ENSDARG0000011334689
zgc:153659ENSDARG0000007144689
igl1c3 / immunoglobulin light 1 constant 3ENSDARG0000007897560


Protein motifs (from Interpro)
Interpro ID Name
 IPR003597  Immunoglobulin C1-set
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006910 phagocytosis, recognition IBA
 biological_processGO:0006911 phagocytosis, engulfment IBA
 biological_processGO:0006958 complement activation, classical pathway IBA
 biological_processGO:0042742 defense response to bacterium IBA
 biological_processGO:0045087 innate immune response IBA
 biological_processGO:0050853 B cell receptor signaling pathway IBA
 biological_processGO:0050871 positive regulation of B cell activation IBA
 cellular_componentGO:0009897 external side of plasma membrane IBA
 cellular_componentGO:0042571 immunoglobulin complex, circulating IBA
 cellular_componentGO:0072562 blood microparticle IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003823 antigen binding IBA
 molecular_functionGO:0034987 immunoglobulin receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr