ENSDARG00000095046


Danio rerio

Features
Gene ID: ENSDARG00000095046
  
Biological name :pold2
  
Synonyms : pold2 / polymerase (DNA directed), delta 2, regulatory subunit
  
Possible biological names infered from orthology : DNA polymerase delta 2, accessory subunit / O35654 / P49005
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 36570508
Gene end: 36579527
  
Corresponding Affymetrix probe sets: Dr.18066.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113340
Ensembl peptide - ENSDARP00000144902
Ensembl peptide - ENSDARP00000122064
NCBI entrez gene - 796456     See in Manteia.
RefSeq - NM_213303
RefSeq Peptide - NP_998468
swissprot - B0R0V1
swissprot - B0R0V0
ZFIN ID - ZDB-GENE-030616-157
Ensembl - ENSDARG00000095046
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037932Gallus gallus
 POLD2ENSG00000106628Homo sapiens
 Pold2ENSMUSG00000020471Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007185  DNA polymerase alpha/epsilon, subunit B
 IPR024826  DNA polymerase delta/II small subunit family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006271 DNA strand elongation involved in DNA replication IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IBA
 biological_processGO:0071897 DNA biosynthetic process IEA
 cellular_componentGO:0043625 delta DNA polymerase complex IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003887 DNA-directed DNA polymerase activity IBA


Pathways (from Reactome)
Pathway description
Recognition of DNA damage by PCNA-containing replication complex
Polymerase switching on the C-strand of the telomere
Processive synthesis on the C-strand of the telomere
Telomere C-strand (Lagging Strand) Synthesis
Removal of the Flap Intermediate from the C-strand
Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)
Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
PCNA-Dependent Long Patch Base Excision Repair
Termination of translesion DNA synthesis
HDR through Homologous Recombination (HRR)
Gap-filling DNA repair synthesis and ligation in GG-NER
Dual Incision in GG-NER
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Polymerase switching
Removal of the Flap Intermediate
Processive synthesis on the lagging strand


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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