ENSDARG00000095705


Danio rerio

Features
Gene ID: ENSDARG00000095705
  
Biological name :CDPF1
  
Synonyms : CDPF1 / Q5RGZ1 / si:ch211-239e6.4
  
Possible biological names infered from orthology : cysteine rich DPF motif domain containing 1 / Cysteine-rich DPF motif domain-containing protein 1 / Q6NVV7 / Q8R3A2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 18597162
Gene end: 18606573
  
Corresponding Affymetrix probe sets: Dr.15043.1.S1_at (Zebrafish Array)   Dr.15043.1.S1_s_at (Zebrafish Array)   Dr.15919.1.A1_at (Zebrafish Array)   Dr.20336.1.S1_at (Zebrafish Array)   NM_001025527_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142450
Ensembl peptide - ENSDARP00000145478
Ensembl peptide - ENSDARP00000142576
Ensembl peptide - ENSDARP00000114819
Ensembl peptide - ENSDARP00000123930
Ensembl peptide - ENSDARP00000129970
NCBI entrez gene - 563220     See in Manteia.
RefSeq - NM_001025527
RefSeq - XM_005164751
RefSeq Peptide - NP_001020698
swissprot - Q5RGZ1
swissprot - A0A140LGS1
swissprot - A0A0R4I9K8
swissprot - F8W4B2
ZFIN ID - ZDB-GENE-041210-170
Ensembl - ENSDARG00000095705
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDPF1ENSGALG00000028840Gallus gallus
 CDPF1ENSG00000205643Homo sapiens
 Cdpf1ENSMUSG00000064284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018785  Cysteine-rich domain, DPF-motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr