ENSDARG00000095863


Danio rerio

Features
Gene ID: ENSDARG00000095863
  
Biological name :afp4
  
Synonyms : afp4 / antifreeze protein type IV
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 45912647
Gene end: 45917683
  
Corresponding Affymetrix probe sets: Dr.696.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000060821
Ensembl peptide - ENSDARP00000145918
NCBI entrez gene - 568707     See in Manteia.
swissprot - Q4L216
ZFIN ID - ZDB-GENE-030131-5217
Ensembl - ENSDARG00000095863
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
afp4 / antifreeze protein type IVENSDARG0000004149082


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006695 cholesterol biosynthetic process IBA
 biological_processGO:0010873 positive regulation of cholesterol esterification IBA
 biological_processGO:0010898 positive regulation of triglyceride catabolic process IBA
 biological_processGO:0019433 triglyceride catabolic process IBA
 biological_processGO:0030300 regulation of intestinal cholesterol absorption IBA
 biological_processGO:0031102 neuron projection regeneration IBA
 biological_processGO:0033344 cholesterol efflux IBA
 biological_processGO:0033700 phospholipid efflux IBA
 biological_processGO:0034372 very-low-density lipoprotein particle remodeling IBA
 biological_processGO:0034380 high-density lipoprotein particle assembly IBA
 biological_processGO:0042157 lipoprotein metabolic process IBA
 biological_processGO:0042632 cholesterol homeostasis IBA
 biological_processGO:0043691 reverse cholesterol transport IBA
 biological_processGO:0045723 positive regulation of fatty acid biosynthetic process IBA
 biological_processGO:0046470 phosphatidylcholine metabolic process IBA
 biological_processGO:0051006 positive regulation of lipoprotein lipase activity IBA
 biological_processGO:0060030 dorsal convergence IMP
 biological_processGO:0070328 triglyceride homeostasis IBA
 biological_processGO:0090504 epiboly IMP
 cellular_componentGO:0034364 high-density lipoprotein particle IBA
 cellular_componentGO:0042627 chylomicron IBA
 cellular_componentGO:0072562 blood microparticle IBA
 molecular_functionGO:0015485 cholesterol binding IBA
 molecular_functionGO:0017127 cholesterol transporter activity IBA
 molecular_functionGO:0031210 phosphatidylcholine binding IBA
 molecular_functionGO:0060228 phosphatidylcholine-sterol O-acyltransferase activator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000092 axis axis increased length , abnormal
Show

 ZFA:0000106 extension extension decreased size , abnormal
Show

 ZFA:0000135 notochord notochord shape , abnormal
Show

 ZFA:0000155 somite somite morphology , abnormal
somite increased width , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism dead , abnormal
Show

 ZFA:0001114 head head malformed , abnormal
Show

 ZFA:0001115 trunk trunk curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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