ENSDARG00000099022


Danio rerio

Features
Gene ID: ENSDARG00000099022
  
Biological name :faua
  
Synonyms : faua / Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a
  
Possible biological names infered from orthology : FAU / FAU, ubiquitin like and ribosomal protein S30 fusion / Gm9843 / P35544 / P62861
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 54201459
Gene end: 54208344
  
Corresponding Affymetrix probe sets: Dr.1455.1.S1_at (Zebrafish Array)   NM_200737_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000141629
NCBI entrez gene - 393710     See in Manteia.
RefSeq - NM_200737
RefSeq Peptide - NP_957031
swissprot - Q6PC01
ZFIN ID - ZDB-GENE-040426-1700
Ensembl - ENSDARG00000099022
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAUENSG00000149806Homo sapiens
 FauENSMUSG00000038274Mus musculus
 Gm9843ENSMUSG00000050299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
faub / Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b / FAU* / Gm9843* / P35544* / P62861* / FAU, ubiquitin like and ribosomal protein S30 fusion*ENSDARG0000004366376


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR006846  Ribosomal protein S30
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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