ENSDARG00000099793


Danio rerio

Features
Gene ID: ENSDARG00000099793
  
Biological name :cspg5b
  
Synonyms : chondroitin sulfate proteoglycan 5b / cspg5b
  
Possible biological names infered from orthology : chondroitin sulfate proteoglycan 5 / CSPG5 / O95196 / Q71M36
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 19278082
Gene end: 19339337
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135423
Ensembl peptide - ENSDARP00000136195
Ensembl peptide - ENSDARP00000135714
NCBI entrez gene - 559358     See in Manteia.
RefSeq - NM_001044892
RefSeq - XM_005159516
RefSeq Peptide - NP_001038357
swissprot - A0A0R4IMK4
swissprot - A0A0R4INR6
swissprot - A0A0R4INA0
ZFIN ID - ZDB-GENE-060503-368
Ensembl - ENSDARG00000099793
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSPG5ENSGALG00000032184Gallus gallus
 CSPG5ENSG00000114646Homo sapiens
 Cspg5ENSMUSG00000032482Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cspg5a / chondroitin sulfate proteoglycan 5a / CSPG5* / O95196* / Q71M36* / chondroitin sulfate proteoglycan 5*ENSDARG0000006998140


Protein motifs (from Interpro)
Interpro ID Name
 IPR009505  Neural chondroitin sulphate proteoglycan cytoplasmic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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