ENSDARG00000099927


Danio rerio

Features
Gene ID: ENSDARG00000099927
  
Biological name :dpf1
  
Synonyms : D4, zinc and double PHD fingers family 1 / dpf1
  
Possible biological names infered from orthology : double PHD fingers 1 / Q92782 / Q9QX66 / Zinc finger protein neuro-d4
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 14257232
Gene end: 14375571
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135935
Ensembl peptide - ENSDARP00000139398
Ensembl peptide - ENSDARP00000138238
NCBI entrez gene - 566219     See in Manteia.
RefSeq - NM_001328069
RefSeq - NM_001030204
RefSeq Peptide - NP_001025375
RefSeq Peptide - NP_001314998
swissprot - A0A0R4IV70
swissprot - A0A0R4IP72
swissprot - A0A0R4IJH1
ZFIN ID - ZDB-GENE-050913-31
Ensembl - ENSDARG00000099927
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DPF1ENSG00000011332Homo sapiens
 Dpf1ENSMUSG00000030584Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dpf3 / A9LMC0 / D4, zinc and double PHD fingers, family 3 / Q92784* / double PHD fingers 3*ENSDARG0000002530960
dpf2 / D4, zinc and double PHD fingers family 2 / Q61103* / Q92785* / double PHD fingers 2* / Zinc finger protein ubi-d4 *ENSDARG0000001221959
dpf2l / D4, zinc and double PHD fingers family 2, like / DPF2* / Q61103* / Q92785* / double PHD fingers 2* / Zinc finger protein ubi-d4 *ENSDARG0000003729158
phf10 / PHD finger protein 10 / Q8WUB8*ENSDARG0000007008419


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR019787  Zinc finger, PHD-finger
 IPR025750  Requiem/DPF N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0071565 nBAF complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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