ENSDARG00000099936


Danio rerio

Features
Gene ID: ENSDARG00000099936
  
Biological name :nlrc3l
  
Synonyms : nlrc3l / NLR family, CARD domain containing 3-like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 43982088
Gene end: 43995053
  
Corresponding Affymetrix probe sets: Dr.12935.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000153748
Ensembl peptide - ENSDARP00000140535
NCBI entrez gene - 100538217     See in Manteia.
RefSeq - XM_009291963
RefSeq - XM_009291964
swissprot - A0A0R4IY81
ZFIN ID - ZDB-GENE-121214-346
Ensembl - ENSDARG00000099936
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-250k18.6ENSDARG0000009396421
si:dkey-156k2.4ENSDARG0000009156120
si:dkey-238o14.3ENSDARG0000009807720
si:ch211-223k15.1ENSDARG0000011382620
si:dkey-211i20.5ENSDARG0000009959720
si:dkey-240n22.6ENSDARG0000010699820
BX005380.1ENSDARG0000011029020
si:dkey-27n6.1ENSDARG0000009996320
si:ch211-79g12.2 / si:dkey-205i10.1ENSDARG0000011380419
si:ch211-263l8.1 / si:dkey-238o14.1ENSDARG0000010009919
si:dkeyp-100h4.1ENSDARG0000007816719
si:dkey-261o4.9ENSDARG0000010235816
si:ch211-11p18.6ENSDARG0000010236015
si:ch211-76m11.9ENSDARG0000009964312
si:ch211-208f21.3ENSDARG0000009991012
si:rp71-7l19.2ENSDARG000001028534
si:dkeyp-100h4.7ENSDARG000000960672
si:dkeyp-100h4.2ENSDARG000000961091


Protein motifs (from Interpro)
Interpro ID Name
 IPR004020  DAPIN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0014005 microglia development IMP
 biological_processGO:0050728 negative regulation of inflammatory response IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000006 ball ball macrophage apoptotic , abnormal
ball macrophage vacuolated , abnormal
ball macrophage mislocalised , abnormal
ball macrophage aggregated , abnormal
Show

 ZFA:0000008 brain brain has extra parts of type neutrophil , abnormal
brain neutrophil mislocalised , abnormal
brain has fewer parts of type microglial cell , abnormal
brain lacks all parts of type macrophage , abnormal
brain lacks all parts of type microglial cell , abnormal
Show

 ZFA:0001094 whole organism whole organism lacks all parts of type macrophage , abnormal
whole organism has fewer parts of type macrophage , abnormal
whole organism inflammatory , abnormal
Show

 ZFA:0009327 neutrophil neutrophil mislocalised , abnormal
neutrophil adjacent to macrophage , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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