ENSDARG00000099954


Danio rerio

Features
Gene ID: ENSDARG00000099954
  
Biological name :plekhm1
  
Synonyms : pleckstrin homology domain containing, family M (with RUN domain) member 1 / plekhm1
  
Possible biological names infered from orthology : pleckstrin homology and RUN domain containing M1 / Pleckstrin homology domain-containing family M member 1 / Q7TSI1 / Q9Y4G2
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 4920451
Gene end: 4963153
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132290
Ensembl peptide - ENSDARP00000141964
NCBI entrez gene - 564048     See in Manteia.
RefSeq - NM_001327851
RefSeq - NM_001327852
RefSeq - XM_021480128
RefSeq Peptide - NP_001314780
RefSeq Peptide - NP_001314781
swissprot - A3KNA4
swissprot - A0A0R4IDQ8
ZFIN ID - ZDB-GENE-030131-2752
Ensembl - ENSDARG00000099954
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLEKHM1ENSGALG00000000201Gallus gallus
 Q9Y4G2ENSG00000225190Homo sapiens
 Q7TSI1ENSMUSG00000034247Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plekhm3 / pleckstrin homology domain containing, family M, member 3 / Q6ZWE6* / pleckstrin homology domain containing M3*ENSDARG0000003063318
rubcn / RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein / Q92622* / Q80U62* / RUN and cysteine rich domain containing beclin 1 interacting protein* / Run domain...ENSDARG0000007875215
def8 / differentially expressed in FDCP 8 homolog (mouse) / Q6ZN54* / Q99J78* / Differentially expressed in FDCP 8 * / differentially expressed in FDCP 8 homolog*ENSDARG000000682089
rubcnl / RUN and cysteine rich domain containing beclin 1 interacting protein like / Q9H714*ENSDARG000000884027
CU570893.1ENSDARG000001147153


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR004012  RUN domain
 IPR011993  PH-like domain superfamily
 IPR025258  Putative zinc-RING and/or ribbon


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr